Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.7■□□□□ 0.42
Apaf1O88879 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Gm6244-201ENSMUST00000178732 841 ntBASIC17.7■□□□□ 0.42
Apaf1O88879 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.7■□□□□ 0.42
Apaf1O88879 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Apaf1O88879 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Apaf1O88879 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Apaf1O88879 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.69■□□□□ 0.42
Apaf1O88879 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.69■□□□□ 0.42
Apaf1O88879 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.69■□□□□ 0.42
Apaf1O88879 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Gm9002-201ENSMUST00000178437 499 ntBASIC17.69■□□□□ 0.42
Apaf1O88879 Gm44397-201ENSMUST00000195950 113 ntBASIC17.69■□□□□ 0.42
Apaf1O88879 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Apaf1O88879 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Apaf1O88879 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Apaf1O88879 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.68■□□□□ 0.42
Apaf1O88879 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Apaf1O88879 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Apaf1O88879 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.68■□□□□ 0.42
Apaf1O88879 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.68■□□□□ 0.42
Apaf1O88879 Gm27892-201ENSMUST00000185017 106 ntBASIC17.68■□□□□ 0.42
Apaf1O88879 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.68■□□□□ 0.42
Apaf1O88879 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.68■□□□□ 0.42
Apaf1O88879 Matn2-206ENSMUST00000228570 2798 ntBASIC17.68■□□□□ 0.42
Apaf1O88879 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Apaf1O88879 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.68■□□□□ 0.42
Apaf1O88879 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.68■□□□□ 0.42
Apaf1O88879 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Apaf1O88879 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.67■□□□□ 0.42
Apaf1O88879 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Apaf1O88879 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Apaf1O88879 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Apaf1O88879 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.67■□□□□ 0.42
Apaf1O88879 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.67■□□□□ 0.42
Apaf1O88879 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Apaf1O88879 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.67■□□□□ 0.42
Apaf1O88879 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Apaf1O88879 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Apaf1O88879 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Apaf1O88879 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.67■□□□□ 0.42
Apaf1O88879 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Apaf1O88879 Gm8602-201ENSMUST00000184045 607 ntBASIC17.67■□□□□ 0.42
Apaf1O88879 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.67■□□□□ 0.42
Apaf1O88879 Gm7287-201ENSMUST00000205267 602 ntBASIC17.67■□□□□ 0.42
Apaf1O88879 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Apaf1O88879 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.67■□□□□ 0.42
Apaf1O88879 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.67■□□□□ 0.42
Apaf1O88879 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms