Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
ClppO88696 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.38□□□□□ -0.27
ClppO88696 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Gm12091-201ENSMUST00000146791 830 ntBASIC13.38□□□□□ -0.27
ClppO88696 Gm23984-201ENSMUST00000157139 203 ntBASIC13.38□□□□□ -0.27
ClppO88696 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.38□□□□□ -0.27
ClppO88696 Gm43433-201ENSMUST00000196573 481 ntBASIC13.38□□□□□ -0.27
ClppO88696 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Gm45384-201ENSMUST00000210451 277 ntBASIC13.38□□□□□ -0.27
ClppO88696 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.38□□□□□ -0.27
ClppO88696 Gm18041-201ENSMUST00000218210 618 ntBASIC13.38□□□□□ -0.27
ClppO88696 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.38□□□□□ -0.27
ClppO88696 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClppO88696 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ClppO88696 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.38□□□□□ -0.27
ClppO88696 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ClppO88696 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.37□□□□□ -0.27
ClppO88696 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ClppO88696 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.37□□□□□ -0.27
ClppO88696 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.37□□□□□ -0.27
ClppO88696 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.37□□□□□ -0.27
ClppO88696 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.37□□□□□ -0.27
ClppO88696 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.37□□□□□ -0.27
ClppO88696 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.37□□□□□ -0.27
ClppO88696 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.37□□□□□ -0.27
ClppO88696 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.37□□□□□ -0.27
ClppO88696 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClppO88696 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.36□□□□□ -0.27
ClppO88696 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.36□□□□□ -0.27
ClppO88696 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ClppO88696 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ClppO88696 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.36□□□□□ -0.27
ClppO88696 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClppO88696 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms