Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mmp8O70138 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mmp8O70138 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Mmp8O70138 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.6■□□□□ 0.25
Mmp8O70138 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Mmp8O70138 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Mmp8O70138 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Gm2495-201ENSMUST00000191160 466 ntBASIC16.6■□□□□ 0.25
Mmp8O70138 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Gm38223-201ENSMUST00000194484 695 ntBASIC16.6■□□□□ 0.25
Mmp8O70138 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.6■□□□□ 0.25
Mmp8O70138 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Mmp8O70138 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp8O70138 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Mmp8O70138 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.59■□□□□ 0.25
Mmp8O70138 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp8O70138 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mmp8O70138 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp8O70138 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.59■□□□□ 0.25
Mmp8O70138 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Mmp8O70138 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.59■□□□□ 0.25
Mmp8O70138 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mmp8O70138 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.59■□□□□ 0.25
Mmp8O70138 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.59■□□□□ 0.25
Mmp8O70138 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp8O70138 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.59■□□□□ 0.25
Mmp8O70138 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.59■□□□□ 0.25
Mmp8O70138 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp8O70138 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Mmp8O70138 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.58■□□□□ 0.25
Mmp8O70138 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.58■□□□□ 0.25
Mmp8O70138 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp8O70138 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Mmp8O70138 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.58■□□□□ 0.24
Mmp8O70138 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.58■□□□□ 0.24
Mmp8O70138 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.58■□□□□ 0.24
Mmp8O70138 Gm8515-201ENSMUST00000194852 576 ntBASIC16.58■□□□□ 0.24
Mmp8O70138 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.58■□□□□ 0.24
Mmp8O70138 Gm42550-201ENSMUST00000201553 960 ntBASIC16.58■□□□□ 0.24
Mmp8O70138 Gm6983-201ENSMUST00000214912 628 ntBASIC16.58■□□□□ 0.24
Mmp8O70138 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.58■□□□□ 0.24
Mmp8O70138 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Mmp8O70138 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.58■□□□□ 0.24
Mmp8O70138 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mmp8O70138 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Mmp8O70138 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp8O70138 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms