Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.84□□□□□ -0.19
Limk2O54785 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.84□□□□□ -0.19
Limk2O54785 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.84□□□□□ -0.19
Limk2O54785 Gm28911-201ENSMUST00000188837 117 ntBASIC13.84□□□□□ -0.19
Limk2O54785 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Limk2O54785 Gm5035-201ENSMUST00000215581 927 ntBASIC13.84□□□□□ -0.19
Limk2O54785 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Limk2O54785 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.84□□□□□ -0.19
Limk2O54785 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Limk2O54785 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Limk2O54785 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.84□□□□□ -0.19
Limk2O54785 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limk2O54785 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Limk2O54785 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Limk2O54785 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Limk2O54785 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Limk2O54785 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Limk2O54785 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.83□□□□□ -0.19
Limk2O54785 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.83□□□□□ -0.2
Limk2O54785 Gm4984-201ENSMUST00000115987 360 ntBASIC13.83□□□□□ -0.2
Limk2O54785 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.83□□□□□ -0.2
Limk2O54785 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Limk2O54785 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.83□□□□□ -0.2
Limk2O54785 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.83□□□□□ -0.2
Limk2O54785 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.83□□□□□ -0.2
Limk2O54785 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.83□□□□□ -0.2
Limk2O54785 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Limk2O54785 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.83□□□□□ -0.2
Limk2O54785 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Limk2O54785 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limk2O54785 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Limk2O54785 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.82□□□□□ -0.2
Limk2O54785 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Gm15770-201ENSMUST00000117498 584 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Gm12341-201ENSMUST00000119724 503 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.82□□□□□ -0.2
Limk2O54785 AY702102-202ENSMUST00000194651 1173 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.82□□□□□ -0.2
Limk2O54785 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.82□□□□□ -0.2
Limk2O54785 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Limk2O54785 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Limk2O54785 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms