Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Gm9719-201ENSMUST00000162765 543 ntBASIC15.33■□□□□ 0.04
Stx1aO35526 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Stx1aO35526 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.33■□□□□ 0.04
Stx1aO35526 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Gm10175-201ENSMUST00000086013 645 ntBASIC15.33■□□□□ 0.04
Stx1aO35526 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Stx1aO35526 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stx1aO35526 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Gm5566-201ENSMUST00000116118 459 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.32■□□□□ 0.04
Stx1aO35526 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.32■□□□□ 0.04
Stx1aO35526 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Stx1aO35526 Gm9824-201ENSMUST00000178707 561 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 Gm6916-202ENSMUST00000205523 195 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 Dupd1-202ENSMUST00000224735 548 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Stx1aO35526 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.32■□□□□ 0.04
Stx1aO35526 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.32■□□□□ 0.04
Stx1aO35526 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stx1aO35526 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Stx1aO35526 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Stx1aO35526 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Stx1aO35526 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Stx1aO35526 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.31■□□□□ 0.04
Stx1aO35526 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm18766-201ENSMUST00000189811 808 ntBASIC15.31■□□□□ 0.04
Stx1aO35526 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Stx1aO35526 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.31■□□□□ 0.04
Stx1aO35526 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Stx1aO35526 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stx1aO35526 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Stx1aO35526 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms