Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Gm13223-201ENSMUST00000118609 747 ntBASIC12.18□□□□□ -0.46
OtpO09113 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.18□□□□□ -0.46
OtpO09113 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
OtpO09113 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
OtpO09113 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
OtpO09113 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
OtpO09113 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
OtpO09113 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
OtpO09113 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
OtpO09113 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
OtpO09113 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
OtpO09113 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
OtpO09113 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
OtpO09113 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
OtpO09113 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.17□□□□□ -0.46
OtpO09113 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
OtpO09113 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.17□□□□□ -0.46
OtpO09113 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
OtpO09113 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
OtpO09113 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
OtpO09113 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
OtpO09113 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
OtpO09113 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.17□□□□□ -0.46
OtpO09113 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
OtpO09113 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
OtpO09113 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
OtpO09113 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
OtpO09113 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.16□□□□□ -0.46
OtpO09113 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
OtpO09113 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
OtpO09113 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtpO09113 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
OtpO09113 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms