Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Gm10275-202ENSMUST00000168697 495 ntBASIC10.86□□□□□ -0.67
Ndufb11O09111 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Gm44719-201ENSMUST00000206404 149 ntBASIC10.86□□□□□ -0.67
Ndufb11O09111 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Gm10275-201ENSMUST00000092620 635 ntBASIC10.86□□□□□ -0.67
Ndufb11O09111 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ndufb11O09111 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ndufb11O09111 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gm45747-201ENSMUST00000212203 999 ntBASIC10.85□□□□□ -0.67
Ndufb11O09111 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.85□□□□□ -0.67
Ndufb11O09111 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.85□□□□□ -0.67
Ndufb11O09111 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ndufb11O09111 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.85□□□□□ -0.67
Ndufb11O09111 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.84□□□□□ -0.67
Ndufb11O09111 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.84□□□□□ -0.67
Ndufb11O09111 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ndufb11O09111 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ndufb11O09111 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms