Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Gm13611-201ENSMUST00000118269 318 ntBASIC8.35□□□□□ -1.07
Pkd1O08852 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Pkd1O08852 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC8.35□□□□□ -1.07
Pkd1O08852 AC107638.1-201ENSMUST00000213690 1061 ntBASIC8.35□□□□□ -1.07
Pkd1O08852 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Pkd1O08852 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Pkd1O08852 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Pkd1O08852 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm8018-201ENSMUST00000173536 789 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC8.34□□□□□ -1.07
Pkd1O08852 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 AC132901.1-201ENSMUST00000224345 508 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Pkd1O08852 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Pkd1O08852 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Pkd1O08852 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Pkd1O08852 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Pkd1O08852 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm23949-201ENSMUST00000104027 127 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 Gm23218-201ENSMUST00000158124 276 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC8.34□□□□□ -1.07
Pkd1O08852 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm45598-202ENSMUST00000210719 986 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC8.34□□□□□ -1.07
Pkd1O08852 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm37736-201ENSMUST00000193564 2802 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC8.34□□□□□ -1.07
Pkd1O08852 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Pkd1O08852 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.34□□□□□ -1.07
Pkd1O08852 Gm18730-201ENSMUST00000218038 343 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 AC154222.2-201ENSMUST00000225848 607 ntBASIC8.34□□□□□ -1.07
Pkd1O08852 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Pkd1O08852 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Pkd1O08852 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm5070-201ENSMUST00000177599 862 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Gm45691-201ENSMUST00000206905 1120 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Arhgef33-207ENSMUST00000224966 490 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Dhrs4-202ENSMUST00000226168 828 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Gm8325-201ENSMUST00000099086 453 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms