Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa8J3QNX5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.42□□□□□ -0.42
Shisa8J3QNX5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 AA543401-201ENSMUST00000164248 1269 ntBASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gm18027-201ENSMUST00000218947 619 ntBASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Psmb5-202ENSMUST00000227257 622 ntBASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa8J3QNX5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms