Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Gm13369-201ENSMUST00000119442 987 ntBASIC16.35■□□□□ 0.21
NpcdF8VQB8 Gm4986-201ENSMUST00000119731 549 ntBASIC16.35■□□□□ 0.21
NpcdF8VQB8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.35■□□□□ 0.21
NpcdF8VQB8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.35■□□□□ 0.21
NpcdF8VQB8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NpcdF8VQB8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.34■□□□□ 0.21
NpcdF8VQB8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.34■□□□□ 0.21
NpcdF8VQB8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Gm7029-201ENSMUST00000173226 450 ntBASIC16.34■□□□□ 0.21
NpcdF8VQB8 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.34■□□□□ 0.21
NpcdF8VQB8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.34■□□□□ 0.21
NpcdF8VQB8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
NpcdF8VQB8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.34■□□□□ 0.21
NpcdF8VQB8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NpcdF8VQB8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NpcdF8VQB8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.33■□□□□ 0.2
NpcdF8VQB8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.33■□□□□ 0.2
NpcdF8VQB8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Mir6979-201ENSMUST00000183927 56 ntBASIC16.33■□□□□ 0.2
NpcdF8VQB8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NpcdF8VQB8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms