Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Gm8894-201ENSMUST00000074642 666 ntBASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sptbn4E9PX29 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Gm26361-201ENSMUST00000158868 186 ntBASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sptbn4E9PX29 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gm8738-201ENSMUST00000172606 329 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gm7902-201ENSMUST00000198842 947 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sptbn4E9PX29 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sptbn4E9PX29 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms