Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mzt1-203ENSMUST00000227948 952 ntBASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm11745-201ENSMUST00000121669 448 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm9719-201ENSMUST00000162765 543 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Trav12d-1A0N8R0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Gm25287-201ENSMUST00000103846 110 ntBASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Gm22918-201ENSMUST00000103855 110 ntBASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav12d-1A0N8R0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms