Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm2420-202ENSMUST00000202224 2249 ntBASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.94□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm13223-201ENSMUST00000118609 747 ntBASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm3436-201ENSMUST00000179930 840 ntBASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm6283-201ENSMUST00000182369 1000 ntBASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mir6956-201ENSMUST00000183598 62 ntBASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm27680-201ENSMUST00000184192 160 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Gm43703-201ENSMUST00000200523 763 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav9n-2A0A0G2JDP3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms