Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm14701-201ENSMUST00000117156 348 ntBASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm15653-201ENSMUST00000119247 907 ntBASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm37714-201ENSMUST00000194742 342 ntBASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm3550W4VSN7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Mir1897-201ENSMUST00000122581 272 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm25144-201ENSMUST00000179561 110 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm25352-201ENSMUST00000179815 110 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm2445-201ENSMUST00000182798 989 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm27430-201ENSMUST00000184585 107 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm44333-201ENSMUST00000197168 107 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3550W4VSN7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Gm25948-201ENSMUST00000175334 112 ntBASIC11.6□□□□□ -0.55
Gm3550W4VSN7 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.6□□□□□ -0.55
Gm3550W4VSN7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms