Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm15240-201ENSMUST00000118156 720 ntBASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm18905-201ENSMUST00000205454 928 ntBASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.68□□□□□ -0.22
H2afb2S4R1M3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H2afb2S4R1M3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.66□□□□□ -0.22
H2afb2S4R1M3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Gm9522-201ENSMUST00000182394 926 ntBASIC13.66□□□□□ -0.22
H2afb2S4R1M3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb2S4R1M3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms