Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn8aQ9WTU3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Scn8aQ9WTU3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn8aQ9WTU3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Gm27731-201ENSMUST00000185192 107 ntBASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn8aQ9WTU3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm7561-201ENSMUST00000211203 886 ntBASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm22018-201ENSMUST00000104357 131 ntBASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Gm29705-201ENSMUST00000212598 474 ntBASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms