Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim3Q9R1R2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.88□□□□□ -0.35
Trim3Q9R1R2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm14719-201ENSMUST00000121891 340 ntBASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Mir6977-201ENSMUST00000184960 64 ntBASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim3Q9R1R2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gm6916-202ENSMUST00000205523 195 ntBASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim3Q9R1R2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms