Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Gm10766-202ENSMUST00000194123 606 ntBASIC13.34□□□□□ -0.27
Cdh17Q9R100 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.34□□□□□ -0.27
Cdh17Q9R100 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Gm8396-201ENSMUST00000057361 823 ntBASIC13.34□□□□□ -0.27
Cdh17Q9R100 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Cdh17Q9R100 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh17Q9R100 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh17Q9R100 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh17Q9R100 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh17Q9R100 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh17Q9R100 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
Cdh17Q9R100 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.33□□□□□ -0.28
Cdh17Q9R100 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.33□□□□□ -0.28
Cdh17Q9R100 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.33□□□□□ -0.28
Cdh17Q9R100 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdh17Q9R100 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.32□□□□□ -0.28
Cdh17Q9R100 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Gm43703-201ENSMUST00000200523 763 ntBASIC13.32□□□□□ -0.28
Cdh17Q9R100 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh17Q9R100 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms