Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm5745-201ENSMUST00000183748 313 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Gm14928-201ENSMUST00000120198 477 ntBASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Gm37917-201ENSMUST00000194711 392 ntBASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Gm5186-201ENSMUST00000218781 920 ntBASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Gm15823-201ENSMUST00000064305 670 ntBASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clcf1Q9QZM3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms