Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gm4875-201ENSMUST00000118257 786 ntBASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 AA619741-201ENSMUST00000195095 646 ntBASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gm43703-201ENSMUST00000200523 763 ntBASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb3Q9ERD7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Tubb3Q9ERD7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubb3Q9ERD7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubb3Q9ERD7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubb3Q9ERD7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm24694-201ENSMUST00000180054 110 ntBASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm27663-201ENSMUST00000184839 110 ntBASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm44608-201ENSMUST00000206827 855 ntBASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm9229-201ENSMUST00000222777 126 ntBASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms