Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Gm5466-201ENSMUST00000119395 1890 ntBASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Gm13369-201ENSMUST00000119442 987 ntBASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf1Q9EPU4 Gm14608-201ENSMUST00000120030 1553 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Gm10327-201ENSMUST00000105222 1002 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Gm16479-201ENSMUST00000121706 932 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Snora73a-201ENSMUST00000082453 205 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Gm5620-201ENSMUST00000077991 1348 ntBASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cpsf1Q9EPU4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 CU024892.2-201ENSMUST00000224608 832 ntBASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf1Q9EPU4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms