Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Gm27301-201ENSMUST00000184012 127 ntBASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Gm28659-201ENSMUST00000188013 759 ntBASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim42Q9D2H5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Gm5864-201ENSMUST00000202263 970 ntBASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim42Q9D2H5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Gm15957-201ENSMUST00000118893 974 ntBASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Mir8098-201ENSMUST00000184011 137 ntBASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim42Q9D2H5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms