Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm27772-201ENSMUST00000184900 187 ntBASIC14.01□□□□□ -0.17
Vps28Q9D1C8 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.01□□□□□ -0.17
Vps28Q9D1C8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm6180-201ENSMUST00000065243 498 ntBASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps28Q9D1C8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14□□□□□ -0.17
Vps28Q9D1C8 Gm12341-201ENSMUST00000119724 503 ntBASIC14□□□□□ -0.17
Vps28Q9D1C8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Gm2445-201ENSMUST00000182798 989 ntBASIC14□□□□□ -0.17
Vps28Q9D1C8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Gm37015-201ENSMUST00000192763 1521 ntBASIC14□□□□□ -0.17
Vps28Q9D1C8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14□□□□□ -0.17
Vps28Q9D1C8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps28Q9D1C8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps28Q9D1C8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms