Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm28033-201ENSMUST00000184224 96 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Tmem88Q9D0N8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm4459-201ENSMUST00000118750 468 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms