Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Gm9727-201ENSMUST00000161387 555 ntBASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.61□□□□□ -0.39
Trim13Q9CYB0 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim13Q9CYB0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Gm11779-201ENSMUST00000118541 368 ntBASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.6□□□□□ -0.39
Trim13Q9CYB0 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim13Q9CYB0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim13Q9CYB0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim13Q9CYB0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim13Q9CYB0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms