Protein–RNA interactions for Protein: Q9CSU0

Rprd1b, Regulation of nuclear pre-mRNA domain-containing protein 1B, mousemouse

Known RBP Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1bQ9CSU0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rprd1bQ9CSU0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gm38225-201ENSMUST00000194001 393 ntBASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gm45612-201ENSMUST00000211320 160 ntBASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gm10175-201ENSMUST00000086013 645 ntBASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rprd1bQ9CSU0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Gm11745-201ENSMUST00000121669 448 ntBASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.6□□□□□ -0.39
Rprd1bQ9CSU0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms