Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTRAFQ9CQE8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
RTRAFQ9CQE8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
RTRAFQ9CQE8 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
RTRAFQ9CQE8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Gm11764-201ENSMUST00000120221 623 ntBASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTRAFQ9CQE8 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms