Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim16Q99PP9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim16Q99PP9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.39□□□□□ -0.27
Trim16Q99PP9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.38□□□□□ -0.27
Trim16Q99PP9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.38□□□□□ -0.27
Trim16Q99PP9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.38□□□□□ -0.27
Trim16Q99PP9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim16Q99PP9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.37□□□□□ -0.27
Trim16Q99PP9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms