Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Gm38225-201ENSMUST00000194001 393 ntBASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim8Q99PJ2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.4□□□□□ -0.26
Trim8Q99PJ2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Gm45612-201ENSMUST00000211320 160 ntBASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim8Q99PJ2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Trim8Q99PJ2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Trim8Q99PJ2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim8Q99PJ2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.39□□□□□ -0.27
Trim8Q99PJ2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms