Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm14109-201ENSMUST00000118814 309 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm38144-201ENSMUST00000192790 465 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm10051-201ENSMUST00000145209 414 ntBASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.59□□□□□ -0.23
Cdh23Q99PF4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm24749-201ENSMUST00000157838 343 ntBASIC13.59□□□□□ -0.23
Cdh23Q99PF4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh23Q99PF4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Gm28693-202ENSMUST00000190758 331 ntBASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Daam2-202ENSMUST00000224595 1926 ntBASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh23Q99PF4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Gm37666-201ENSMUST00000194110 866 ntBASIC13.58□□□□□ -0.24
Cdh23Q99PF4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh23Q99PF4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm26361-201ENSMUST00000158868 186 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms