Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.27□□□□□ -0.28
Rnf111Q99ML9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf111Q99ML9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Gm42790-201ENSMUST00000201268 969 ntBASIC13.27□□□□□ -0.29
Rnf111Q99ML9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf111Q99ML9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 AA543401-201ENSMUST00000164248 1269 ntBASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.26□□□□□ -0.29
Rnf111Q99ML9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf111Q99ML9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms