Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Carlr-201ENSMUST00000181515 2574 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx6-1Q99MA9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Gm37259-201ENSMUST00000193903 849 ntBASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx6-1Q99MA9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx6-1Q99MA9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx6-1Q99MA9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms