Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Gm33320-201ENSMUST00000192232 530 ntBASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1b1Q99LU0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Gm15653-201ENSMUST00000119247 907 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Auts2-212ENSMUST00000178555 309 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Gm27533-201ENSMUST00000183800 152 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Shd-206ENSMUST00000225145 998 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms