Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gm15393-201ENSMUST00000120499 219 ntBASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gm5425-201ENSMUST00000214125 459 ntBASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf3Q99LI7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf3Q99LI7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf3Q99LI7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms