Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp16Q99LG0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.41■□□□□ 0.38
Usp16Q99LG0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm12928-201ENSMUST00000117115 573 ntBASIC17.41■□□□□ 0.38
Usp16Q99LG0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm29608-201ENSMUST00000190444 463 ntBASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm5186-201ENSMUST00000218781 920 ntBASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp16Q99LG0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm15371-201ENSMUST00000117057 784 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm9002-201ENSMUST00000178437 499 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp16Q99LG0 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.4■□□□□ 0.38
Usp16Q99LG0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp16Q99LG0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.39■□□□□ 0.37
Usp16Q99LG0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.39■□□□□ 0.37
Usp16Q99LG0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.39■□□□□ 0.37
Usp16Q99LG0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp16Q99LG0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms