Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Gm38144-201ENSMUST00000192790 465 ntBASIC15.7■□□□□ 0.1
Rfc4Q99J62 Gm42627-201ENSMUST00000197347 224 ntBASIC15.7■□□□□ 0.1
Rfc4Q99J62 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rfc4Q99J62 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.7■□□□□ 0.1
Rfc4Q99J62 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfc4Q99J62 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfc4Q99J62 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfc4Q99J62 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Gm17330-201ENSMUST00000221047 165 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Gm45930-201ENSMUST00000221330 292 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Gm26315-201ENSMUST00000083890 321 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Gm10268-201ENSMUST00000085340 555 ntBASIC15.69■□□□□ 0.1
Rfc4Q99J62 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rfc4Q99J62 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gm15770-201ENSMUST00000117498 584 ntBASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gm13350-201ENSMUST00000120519 479 ntBASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.68■□□□□ 0.1
Rfc4Q99J62 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.68■□□□□ 0.1
Rfc4Q99J62 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc4Q99J62 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.67■□□□□ 0.1
Rfc4Q99J62 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.67■□□□□ 0.1
Rfc4Q99J62 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Gm7584-201ENSMUST00000175829 940 ntBASIC15.67■□□□□ 0.1
Rfc4Q99J62 Gm29608-201ENSMUST00000190444 463 ntBASIC15.67■□□□□ 0.1
Rfc4Q99J62 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Gm43118-201ENSMUST00000199149 775 ntBASIC15.67■□□□□ 0.1
Rfc4Q99J62 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc4Q99J62 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rfc4Q99J62 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc4Q99J62 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms