Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gm7775-201ENSMUST00000218871 853 ntBASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Gm9063-201ENSMUST00000223299 582 ntBASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha8Q91Y12 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha8Q91Y12 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha8Q91Y12 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha8Q91Y12 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.33□□□□□ -0.27
Pcdha8Q91Y12 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Pcdha8Q91Y12 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha8Q91Y12 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Gm10766-202ENSMUST00000194123 606 ntBASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha8Q91Y12 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms