Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm17795-201ENSMUST00000214505 757 ntBASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb1Q91Y08 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm21854-201ENSMUST00000179901 471 ntBASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Mir7023-201ENSMUST00000185093 64 ntBASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm20445-201ENSMUST00000061905 565 ntBASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb1Q91Y08 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb1Q91Y08 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.21□□□□□ -0.14
Pcdhb1Q91Y08 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb1Q91Y08 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb1Q91Y08 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb1Q91Y08 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb1Q91Y08 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gm29667-201ENSMUST00000190817 490 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb1Q91Y08 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms