Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm19210-201ENSMUST00000199562 1350 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm38154-201ENSMUST00000195444 340 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb20Q91XZ9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Gm13678-201ENSMUST00000118926 340 ntBASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Gm15529-201ENSMUST00000121833 994 ntBASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms