Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Gm13616-201ENSMUST00000120600 222 ntBASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Mir1897-201ENSMUST00000122581 272 ntBASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Shd-206ENSMUST00000225145 998 ntBASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm12428-201ENSMUST00000119844 727 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm6916-202ENSMUST00000205523 195 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga3Q91XY5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdhga3Q91XY5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Gm33320-201ENSMUST00000192232 530 ntBASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms