Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Gm13689-201ENSMUST00000119360 685 ntBASIC14.07□□□□□ -0.16
Usp3Q91W36 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.07□□□□□ -0.16
Usp3Q91W36 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Matn2-206ENSMUST00000228570 2798 ntBASIC14.07□□□□□ -0.16
Usp3Q91W36 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm2495-201ENSMUST00000191160 466 ntBASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.06□□□□□ -0.16
Usp3Q91W36 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Gm17330-201ENSMUST00000221047 165 ntBASIC14.06□□□□□ -0.16
Usp3Q91W36 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp3Q91W36 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp3Q91W36 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
Usp3Q91W36 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.05□□□□□ -0.16
Usp3Q91W36 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm14201-201ENSMUST00000117627 289 ntBASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Gm45359-201ENSMUST00000210635 427 ntBASIC14.05□□□□□ -0.16
Usp3Q91W36 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp3Q91W36 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.05□□□□□ -0.16
Usp3Q91W36 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.05□□□□□ -0.16
Usp3Q91W36 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms