Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vsx1Q91V10 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Gm6334-201ENSMUST00000207083 228 ntBASIC13.49□□□□□ -0.25
Vsx1Q91V10 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vsx1Q91V10 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.48□□□□□ -0.25
Vsx1Q91V10 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gm12176-201ENSMUST00000121420 875 ntBASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gm38223-201ENSMUST00000194484 695 ntBASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.48□□□□□ -0.25
Vsx1Q91V10 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vsx1Q91V10 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vsx1Q91V10 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vsx1Q91V10 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Vsx1Q91V10 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms