Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm27618-201ENSMUST00000183671 60 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm17837-201ENSMUST00000186435 985 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm38294-201ENSMUST00000192831 381 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm44719-201ENSMUST00000206404 149 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Gm6888-201ENSMUST00000221983 706 ntBASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
H1fooQ8VIK3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H1fooQ8VIK3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm13616-201ENSMUST00000120600 222 ntBASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm14767-201ENSMUST00000121559 586 ntBASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H1fooQ8VIK3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms