Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm12859-201ENSMUST00000117834 427 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm8515-201ENSMUST00000194852 576 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4aQ8VEJ9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm29310-201ENSMUST00000185468 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21825-201ENSMUST00000185728 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm29109-201ENSMUST00000185895 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21896-201ENSMUST00000186520 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21873-201ENSMUST00000186728 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21794-201ENSMUST00000187056 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21880-201ENSMUST00000187275 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21826-201ENSMUST00000187451 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21198-201ENSMUST00000188393 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21749-201ENSMUST00000189343 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21901-201ENSMUST00000189568 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm29424-201ENSMUST00000189716 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm28599-201ENSMUST00000189838 694 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21867-201ENSMUST00000189917 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm29269-201ENSMUST00000190087 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21722-201ENSMUST00000190153 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm28423-201ENSMUST00000190701 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21899-201ENSMUST00000190745 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21910-201ENSMUST00000191163 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm21849-201ENSMUST00000191571 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm28678-201ENSMUST00000191593 696 ntBASIC13.29□□□□□ -0.28
Vps4aQ8VEJ9 Gm20910-201ENSMUST00000193268 696 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms