Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rpa1Q8VEE4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa1Q8VEE4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa1Q8VEE4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa1Q8VEE4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rpa1Q8VEE4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa1Q8VEE4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm25116-201ENSMUST00000157191 122 ntBASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm44771-201ENSMUST00000206975 626 ntBASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa1Q8VEE4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms