Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slf1Q8R3P9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slf1Q8R3P9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Mir3113-201ENSMUST00000175478 76 ntBASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.79□□□□□ -0.2
Slf1Q8R3P9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.79□□□□□ -0.2
Slf1Q8R3P9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slf1Q8R3P9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slf1Q8R3P9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms