Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vmn1r28Q8R2C9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm18624-201ENSMUST00000220966 658 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vmn1r28Q8R2C9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmn1r28Q8R2C9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms