Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm16372-201ENSMUST00000073088 450 ntBASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Gm9823-201ENSMUST00000051212 327 ntBASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp7Q8R1T1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm11618-201ENSMUST00000117946 267 ntBASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm38002-201ENSMUST00000193255 180 ntBASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm37497-201ENSMUST00000195830 798 ntBASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm10268-201ENSMUST00000085340 555 ntBASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp7Q8R1T1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp7Q8R1T1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp7Q8R1T1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp7Q8R1T1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp7Q8R1T1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp7Q8R1T1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.39■□□□□ 0.38
Chmp7Q8R1T1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Gm37008-201ENSMUST00000195712 319 ntBASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp7Q8R1T1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Gm19309-201ENSMUST00000218295 205 ntBASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Chmp7Q8R1T1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms