Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Gm43094-201ENSMUST00000196549 921 ntBASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Acot6-202ENSMUST00000222921 3622 ntBASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sf3a1Q8K4Z5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Gm19220-201ENSMUST00000222682 803 ntBASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms