Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm9083-201ENSMUST00000120423 819 ntBASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm25732-201ENSMUST00000175168 60 ntBASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm4768-201ENSMUST00000206199 686 ntBASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ddx54Q8K4L0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm23270-201ENSMUST00000104055 131 ntBASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm44100-201ENSMUST00000204329 436 ntBASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx54Q8K4L0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Gm28450-201ENSMUST00000187349 638 ntBASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Gm45118-201ENSMUST00000208928 825 ntBASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx54Q8K4L0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Gm12616-201ENSMUST00000118594 382 ntBASIC17.72■□□□□ 0.43
Ddx54Q8K4L0 Gm11637-201ENSMUST00000120601 592 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms